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eDNA emerges as powerful tool for tracking threatened river herring in Chesapeake Bay

Thursday, November 1st, 2018

Article contributed by the University of Maryland Center for Environmental Science

Using environmental DNA (eDNA) to track the presence of fish in waterways is emerging as a powerful tool to detect and understand the abundance of species in aquatic environments. However, relatively few studies have compared the performance of this emerging technology to traditional catch or survey approaches in the field.

Researchers from the University of Maryland Center for Environmental Science and Smithsonian Environmental Research Center field tested using eDNA—tracking the presence of fish by identifying DNA that has been left behind in the water—to detect river herring in tributaries of Maryland’s Chesapeake Bay. They found that tracking and quantifying herring DNA from the environment corresponded well to more traditional field methods and has great potential to assist future monitoring efforts of river herring abundance and habitat use.

“Sampling a single river, you need a net, crew, permits, it can be expensive,” said study author Louis Plough of the University of Maryland Center for Environmental Science. “The eDNA approach is an alternative where you just take water and you get an idea of the abundance of fish.” Click to continue »

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Teaching Moment: Research Takes a Right Turn

Friday, October 5th, 2018

by Philip Kiefer

In the messy world of science, real progress often happens when experiments don’t go as planned. It’s in these moments that scientists learn that the world doesn’t work like they expected. This year, two teaching fellows at the Smithsonian Environmental Research Center (SERC) had a taste of that during a summer project on oyster predation. Although the data they collected didn’t answer their questions about oysters, it did tell an unexpected story about the coastline. They’re bringing that knowledge back to their classrooms, to show students that science isn’t just about collecting facts, but about how to creatively interrogate the natural world.

This summer, SERC’s West Coast lab hosted two fellows from California’s STEM Teacher and Researcher (STAR) program. The fellowship supports STEM teachers who want to actively pursue science research during the summer in order to bring that experience back to their classrooms.

Two people standing in front of a mudflat

Evie Borchard and Jason Thomas, teacher-researchers at SERC, stand in front of prime oyster habitat in the San Francisco Bay. (Philip Kiefer/SERC)

“We want to give teachers the opportunity to do research that they can share with their students,” said Erin Blackwood, an education and outreach coordinator at San Francisco State University who organizes the STAR program locally. “At the same time, the program gives our scientists a new perspective on science education–they have to think about how they would teach their research to a high-school student.”

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Invasive Plants Can Boost Blue Carbon Storage

Monday, October 1st, 2018

by Kristen Minogue

Green marsh banks alongside river on a cloudy day

Some invasive plants like Phragmites australis, the light-brown stalks on this Maryland marsh, could more than double the ability of marshes and other coastal ecosystems to store blue carbon. (Credit: Gary Peresta/SERC)

When invasive species enter the picture, things are rarely black and white. A new paper has revealed that some plant invaders could help fight climate change by making it easier for ecosystems to store “blue carbon”—the carbon stored in coastal environments like salt marshes, mangroves and seagrasses. But other invaders, most notably animals, can do the exact opposite.

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New Invasive Bryozoan Arrives in Alaskan Waters

Thursday, September 27th, 2018

By Philip Kiefer

Alaska has a near-pristine marine ecosystem: There are fewer invasive species in its waters than almost any other state in the U.S. But that could be changing. With help from local volunteers, biologists at the Smithsonian Environmental Research Center (SERC) and Temple University have reported a new invasive species in the Ketchikan region, the invertebrate filter-feeder Bugula neritina, and documented the continuing spread of three other non-native species.

A branching animal, shaped like a bunch of pine needles.

The newly discovered invasive bryozoan, Bugula neritina. (Melissa Frey/Royal BC Museum)

Ketchikan, a town of about 8,000 people on the southern tip of Alaska, is a gateway to more remote Alaskan waters in the north. It sits fewer than 100 nautical miles from British Columbia, so invasive species travelling from southern ports are likely to appear in Ketchikan first. But detecting marine invasive species is a constant challenge, even in a single harbor. By collaborating with citizen scientists from Ketchikan, Smithsonian researchers were able to document these new invasive species hopefully as soon as they arrived.

The invasive tunicate Botrylloides violaecus has nearly completely covered this crab’s shell. (Gary Freitag/University of Alaska Fairbanks)

“It’s really important to know when new non-native species show up. They may be tiny invertebrates, but they can create big problems,” said lead author Laura Jurgens, who was a SERC postdoc at the time of the study. “Early detection means you have a better chance of controlling them before the populations get established. In other places, like California, Oregon and Washington, these organisms have displaced local marine animals or had economic impacts by fouling boats, fishing or aquaculture gear.”

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800 Million Tons of Blue Carbon May Lie Buried in U.S. Tidal Wetlands

Thursday, June 21st, 2018

by Kristen Minogue

Man with muddy clothes in grassy wetland

Smithsonian ecologist James Holmquist explores a wetland in Humboldt Bay, California. (Credit: Lauren Brown)

It’s a true story of “grassroots science.” A team of over two dozen researchers set out to estimate how much carbon tidal wetlands across the U.S. can store. But the official datasets didn’t give them much info to work with. So they pooled their resources, creating a new dataset of nearly 2,000 wetland soil cores.

Their final estimate: Nearly 800 million tons of carbon may lie buried in the tidal wetlands of the contiguous U.S. The team published the discovery June 21, in a new study in Scientific Reports led by the Smithsonian Environmental Research Center. The study also leaves another major legacy. The 1,959 soil cores they compiled could help finally unlock some secrets of wetlands, ecosystems that have been overlooked for centuries.

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Is Your Plant Dead or Just Dormant?

Thursday, May 10th, 2018

by Mollie McNeel

Pink lady’s slipper (Cypripedium acaule), an orchid that can remain dormant for over 20 years. (Credit: SERC)

If a gardener told you that her plants had died and had come back to life years later, you might think she had gone crazy. But actually, she may be on to something.

Some fully-grown plants can “hibernate” in the soil for up to 20 years, researchers from the Smithsonian Environmental Research Center (SERC) discovered in a study published in the May issue of Ecology Letters.

The so-called “Rip Van Winkle” plants, nicknamed after the fictional character who slept for two decades, include many species of orchids and some ferns. Click to continue »

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The Ugly Fish That Sings Its Own Song

Friday, April 27th, 2018

by Kristen Minogue

Male Bocon toadfish of Panama attract mates by singing in a series of “grunts” and “boops.”
(Photo: Study authors)

The sing-off begins when the sun goes down. Every night off the coast of Bocas del Toro, Panama, Bocon toadfish start calling from their burrows, trying to win over females by showing off their vocal talents and drowning out the competition.

If you’ve never heard of the singing toadfish, you’re not alone. They don’t have the charisma of dolphins or whales. They’re mud-colored reef dwellers, with bulging eyes, puffed-out cheeks and fleshy barbels dangling from their mouths. By most human standards, the toadfish isn’t exactly the prettiest fish in the sea.

“It’s kind of like a troll that lives under a bridge and sings,” said Erica Staaterman, a marine biologist who recorded individual toadfish songs in Panama for a new study published this month.

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Chesapeake Bay’s Underwater Plants Stage Record-Breaking Comeback, Thanks to Nutrient Diet

Monday, March 5th, 2018

by Kristen Minogue

A scientist tests water quality and seagrass biomass on the Susquehanna Flats, in upper Chesapeake Bay. (Cassie Gurbisz)

For a long time, it seemed the odds were never in their favor. With seagrass wasting disease, hurricanes and chronic pollution, tens of thousands of acres of Chesapeake Bay underwater plants vanished between the 1950s and 1970s, marking the largest decline in over four centuries. But now, thanks to concerted efforts to rein in harmful nutrients like nitrogen and phosphorus, underwater flora can celebrate a new victory: the largest underwater grass resurgence ever recorded.

A team of 14 Chesapeake scientists came out with the discovery on Monday, in a new study published in Proceedings of the National Academy of Sciences. The scientists found that since 1984, average nitrogen levels in the Bay have dropped 23 percent, and phosphorus has dropped 8 percent. As a result, underwater plants in Chesapeake Bay have shot up more than four-fold. Click to continue »

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The Ocean Is Losing Its Breath. Here’s the Global Scope.

Thursday, January 4th, 2018

by Kristen Minogue

Low oxygen caused the death of these corals and others in Bocas del Toro, Panama. The dead crabs pictured also succumbed to the loss of dissolved oxygen.
(Credit: Arcadio Castillo/Smithsonian)

In the past 50 years, the amount of water in the open ocean with zero oxygen has gone up more than fourfold. In coastal water bodies, including estuaries and seas, low-oxygen sites have increased more than 10-fold since 1950. Scientists expect oxygen to continue dropping even outside these zones as Earth warms. To halt the decline, the world needs to rein in both climate change and nutrient pollution, an international team of scientists asserted in a new paper published Jan. 4 in Science.

“Oxygen is fundamental to life in the oceans,” said Denise Breitburg, lead author and marine ecologist with the Smithsonian Environmental Research Center. “The decline in ocean oxygen ranks among the most serious effects of human activities on the Earth’s environment.”

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In San Francisco, One Wet Winter Can Switch Up Bay’s Invasive Species

Thursday, December 7th, 2017

Winter rains make Bay less salty, knocking back some invaders

by Kristen Minogue

Marine ecologist Andrew Chang tracks invasive species in California, and is discovering ways climate change and extreme weather can alter the playing field. (Credit: Julia Blum)

For many Californians, last year’s wet winter triggered a case of whiplash. After five years of drought, rain from October 2016 to February 2017 broke more than a century of records thanks to a series of “Pineapple Express” storms, referring to atmospheric rivers that ferry moisture from Hawaii to the Pacific Coast. In San Francisco Bay, Smithsonian Environmental Research Center biologists discovered a hidden side effect: All that freshwater rain can turn the tables on some of the bay’s invasive species.

“As you get wetter and wetter, there are fewer and fewer [marine] species that can tolerate those conditions,” said Andrew Chang, lead author of the new study published Dec. 7 in Global Change Biology.

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Posted in California, Climate Change, Ecology, Extreme Weather, Invasive Species, Publications, Tidings from the Sunset Coast | Comments Off on In San Francisco, One Wet Winter Can Switch Up Bay’s Invasive Species

Shorelines

Life and science at the Smithsonian Environmental Research Center

Publications

...now browsing by category

eDNA emerges as powerful tool for tracking threatened river herring in Chesapeake Bay

Teaching Moment: Research Takes a Right Turn

Invasive Plants Can Boost Blue Carbon Storage

New Invasive Bryozoan Arrives in Alaskan Waters

800 Million Tons of Blue Carbon May Lie Buried in U.S. Tidal Wetlands

Is Your Plant Dead or Just Dormant?

The Ugly Fish That Sings Its Own Song

Chesapeake Bay’s Underwater Plants Stage Record-Breaking Comeback, Thanks to Nutrient Diet

The Ocean Is Losing Its Breath. Here’s the Global Scope.

In San Francisco, One Wet Winter Can Switch Up Bay’s Invasive Species